| Protein ZmOFP4 | |
|---|---|
|
ZmOFP4 is a protein in the OVATE family.
|
|
| Information | |
| TF Name: | ZmOFP4 |
| Species: | Maize |
| TF Family: | OVATE |
| Gene Name(Synonym): | OFP4 |
| Uniprot ID: | B6U5V3 |
| Subgenome: | 1 |
Protein ZmOFP4
ZmOFP4 is a protein in the OVATE family.
| Overview of domains present in v5 transcripts | |
|---|---|
| PF04844 | |
| Zm00001eb016140_T001 |  |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d029067 | DAPseq |  |
sequence | fimo | position |
| Zm00001d029067 | DAPseq |  |
sequence | fimo | position |
| Zm00001d029067 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d029067 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmOFP4 is the regulator
Interactions where ZmOFP4 is the target
Expand
Zm00001eb016140_T001 from maize genome v5
Amino Acid Sequence
Copy to clipboard
MPAPKWFQKLRGRRSKGKQQGPCARGLAAEDAPAQGQRPSSLPAPCAVSPNRASYYFASADRARQDRDLPCAADAAAALL
DVRVDVVHRRAGDRRLGGLDAPPGTPELQLRPIVTRPPVDDASASGGVSSASATTSAATTPSTRARRFHVSSPMARRRRR
RRCDHDSVAIKKGKAAAAEEEEEEGEVSPVPSLRAPTRRRRRRWLYESLVVVKTSSDPERELAESMSEMVVANGIRSSED
LEELLACYLALNAAEHHRAVVAAFRRIWLLLDKHRLLLI
MPAPKWFQKLRGRRSKGKQQGPCARGLAAEDAPAQGQRPSSLPAPCAVSPNRASYYFASADRARQDRDLPCAADAAAALL
DVRVDVVHRRAGDRRLGGLDAPPGTPELQLRPIVTRPPVDDASASGGVSSASATTSAATTPSTRARRFHVSSPMARRRRR
RRCDHDSVAIKKGKAAAAEEEEEEGEVSPVPSLRAPTRRRRRRWLYESLVVVKTSSDPERELAESMSEMVVANGIRSSED
LEELLACYLALNAAEHHRAVVAAFRRIWLLLDKHRLLLI
MPAPKWFQKLRGRRSKGKQQGPCARGLAAEDAPAQGQRPSSLPAPCAVSPNRASYYFASADRARQDRDLPCAADAAAALL
DVRVDVVHRRAGDRRLGGLDAPPGTPELQLRPIVTRPPVDDASASGGVSSASATTSAATTPSTRARRFHVSSPMARRRRR
RRCDHDSVAIKKGKAAAAEEEEEEGEVSPVPSLRAPTRRRRRRWLYESLVVVKTSSDPERELAESMSEMVVANGIRSSED
LEELLACYLALNAAEHHRAVVAAFRRIWLLLDKHRLLLI
MPAPKWFQKLRGRRSKGKQQGPCARGLAAEDAPAQGQRPSSLPAPCAVSPNRASYYFASADRARQDRDLPCAADAAAALL
DVRVDVVHRRAGDRRLGGLDAPPGTPELQLRPIVTRPPVDDASASGGVSSASATTSAATTPSTRARRFHVSSPMARRRRR
RRCDHDSVAIKKGKAAAAEEEEEEGEVSPVPSLRAPTRRRRRRWLYESLVVVKTSSDPERELAESMSEMVVANGIRSSED
LEELLACYLALNAAEHHRAVVAAFRRIWLLLDKHRLLLI
MPAPKWFQKLRGRRSKGKQQGPCARGLAAEDAPAQGQRPSSLPAPCAVSPNRASYYFASADRARQDRDLPCAADAAAALL
DVRVDVVHRRAGDRRLGGLDAPPGTPELQLRPIVTRPPVDDASASGGVSSASATTSAATTPSTRARRFHVSSPMARRRRR
RRCDHDSVAIKKGKAAAAEEEEEEGEVSPVPSLRAPTRRRRRRWLYESLVVVKTSSDPERELAESMSEMVVANGIRSSED
LEELLACYLALNAAEHHRAVVAAFRRIWLLLDKHRLLLI
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF04844 |
|
| Hover here to show all domains | |
Nucleotide Sequence
Copy to clipboard
Expand
CCGATCTCCCCATTACATATAACTT...
CCGATCTCCCCATTACATATAACTTTGATCACGCGAGTGCTGCTCCCAATTCCCAAGGCCTGCACCATCTAGCAGGCCGTCAAGCCAGCCAGTTCCACACTTCCACTTCCACAGGCGCGCAGCCGGCCGCTCACGTAACGCCAACTCCCCTGTCTCCGCGCGGCTGCAGCCGACGCCGGCCTCTCTGTCCCCGTGTGTCCTGCTGCCTATCTTCGCTCCACGTCCACGGTGACACCATGCCGGCGCCCAAGTGGTTCCAGAAGCTCCGGGGGAGGAGGAGCAAGGGCAAGCAGCAAGGCCCGTGCGCCAGAGGCCTCGCCGCCGAGGACGCGCCGGCGCAGGGCCAGCGCCCGTCGTCGCTGCCAGCGCCCTGCGCCGTGTCCCCCAACCGGGCGTCCTACTACTTCGCCAGCGCGGACCGCGCGCGCCAGGACAGGGACCTCCCCTGCGCCGCCGACGCGGCGGCGGCCCTGCTGGACGTCCGCGTCGACGTGGTGCACCGCCGCGCGGGCGACCGGCGGCTCGGCGGCCTCGACGCGCCGCCCGGGACGCCCGAGCTCCAGCTGCGGCCCATCGTCACGAGGCCCCCCGTCGACGACGCCTCGGCCAGCGGTGGCGTCAGCAGCGCCAGCGCCACCACGTCGGCAGCCACCACGCCGTCCACCAGGGCGCGCAGGTTCCACGTGAGCTCGCCTATGGCCAGGCGCCGGCGCCGGCGCCGGTGCGACCACGACAGCGTCGCGATCAAGAAGGGGAAAGCGGCGGCCGCGGAGGAGGAGGAGGAGGAGGGGGAGGTGTCGCCGGTGCCGTCCCTGCGCGCGCCCACGCGGCGGCGAAGGCGGCGGTGGCTGTACGAGAGCCTGGTGGTGGTGAAGACGTCGTCGGACCCGGAGCGGGAGCTGGCGGAGAGCATGTCCGAGATGGTGGTGGCCAACGGCATCCGCTCGTCCGAGGACCTGGAGGAGCTCCTCGCGTGCTACCTCGCGCTCAACGCCGCCGAGCACCACCGCGCCGTCGTCGCCGCGTTCCGCCGCATCTGGCTCCTCCTCGACAAGCACAGGCTGCTGCTCATCTAGGCACATCGTGCAGCAGCCGCGCACCTCGCCAGCTGACGGCGCAGCTACCGTAGCGTAAACAGTGCTATCGTGTGAGCTGTGACGACGAACATGCTGCACGCCATGCCATGCCATGCCTGCATGCATCTTGCCGTGTTTATAATCGACACCTATTTTAGTTGAGTTGGTTGGTTCATCTTGATTGCACATTCGTGCCGCAATCGCGTTGCGACGG
GRMZM2G075988_T01 from maize genome v3
Amino Acid Sequence
Copy to clipboard
MFGNISDLPITYNFDHASAAPNSQGLHHLAGRQASQFHTSTSTGAQPAAHVTPTPLSPRGCSRRRPLCPRVSCCLSSLHV
HGDTMPAPKWFQKLRGRRSKGKQQGPCARGLAAEDAPAQGQRPSSLPAPCAVSPNRASYYFASADRARQDRDLPCAADAA
AALLDVRVDVVHRRAGDRRLGGLDAPPGTPELQLRPIVTRPPVDDASASGGVSSASATTSAATTPSTRARRFHVSSPMAR
RRRRRRCDHDSVAIKKGKAAAAEEEEEEGEVSPVPSLRAPTRRRRRRWLYESLVVVKTSSDPERELAESMSEMVVANGIR
SSEDLEELLACYLALNAAEHHRAVVAAFRRIWLLLDKHRLLLI
Nucleotide Sequence
Copy to clipboard
Expand
GTATTCTACGAGTAATAACAACAAG...
GTATTCTACGAGTAATAACAACAAGAATGTTTGGAAACATTTCCGATCTCCCCATTACATATAACTTTGATCACGCGAGTGCTGCTCCCAATTCCCAAGGCCTGCACCATCTAGCAGGCCGTCAAGCCAGCCAGTTCCACACTTCCACTTCCACAGGCGCGCAGCCGGCCGCTCACGTAACGCCAACTCCCCTGTCTCCGCGCGGCTGCAGCCGACGCCGGCCTCTCTGTCCCCGTGTGTCCTGCTGCCTATCTTCGCTCCACGTCCACGGTGACACCATGCCGGCGCCCAAGTGGTTCCAGAAGCTCCGGGGGAGGAGGAGCAAGGGCAAGCAGCAAGGCCCGTGCGCCAGAGGCCTCGCCGCCGAGGACGCGCCGGCGCAGGGCCAGCGCCCGTCGTCGCTGCCAGCGCCCTGCGCCGTGTCCCCCAACCGGGCGTCCTACTACTTCGCCAGCGCGGACCGCGCGCGCCAGGACAGGGACCTCCCCTGCGCCGCCGACGCGGCGGCGGCCCTGCTGGACGTCCGCGTCGACGTGGTGCACCGCCGCGCGGGCGACCGGCGGCTCGGCGGCCTCGACGCGCCGCCCGGGACGCCCGAGCTCCAGCTGCGGCCCATCGTCACGAGGCCCCCCGTCGACGACGCCTCGGCCAGCGGTGGCGTCAGCAGCGCCAGCGCCACCACGTCGGCAGCCACCACGCCGTCCACCAGGGCGCGCAGGTTCCACGTGAGCTCGCCTATGGCCAGGCGCCGGCGCCGGCGCCGGTGCGACCACGACAGCGTCGCGATCAAGAAGGGGAAAGCGGCGGCCGCGGAGGAGGAGGAGGAGGAGGGGGAGGTGTCGCCGGTGCCGTCCCTGCGCGCGCCCACGCGGCGGCGAAGGCGGCGGTGGCTGTACGAGAGCCTGGTGGTGGTGAAGACGTCGTCGGACCCGGAGCGGGAGCTGGCGGAGAGCATGTCCGAGATGGTGGTGGCCAACGGCATCCGCTCGTCCGAGGACCTGGAGGAGCTCCTCGCGTGCTACCTCGCGCTCAACGCCGCCGAGCACCACCGCGCCGTCGTCGCCGCGTTCCGCCGCATCTGGCTCCTCCTCGACAAGCACAGGCTGCTGCTCATCTAGGCACATCGTGCAGCAGCCGCGCACCTCGCCAGCTGACGGCGCAGCTACCGTAGCGTAAACAGTGCTATCGTGTGAGCTGTGACGACGAACATGCTGCACGCCATGCCATGCCATGCCTGCATGCATCTTGCCGTGTTTATAATCGACACCTATTTTAGTT
Zm00001d029067_T001 from maize genome v4
Amino Acid Sequence
Copy to clipboard
MPAPKWFQKLRGRRSKGKQQGPCARGLAAEDAPAQGQRPSSLPAPCAVSPNRASYYFASADRARQDRDLPCAADAAAALL
DVRVDVVHRRAGDRRLGGLDAPPGTPELQLRPIVTRPPVDDASASGGVSSASATTSAATTPSTRARRFHVSSPMARRRRR
RRCDHDSVAIKKGKAAAAEEEEEEGEVSPVPSLRAPTRRRRRRWLYESLVVVKTSSDPERELAESMSEMVVANGIRSSED
LEELLACYLALNAAEHHRAVVAAFRRIWLLLDKHRLLLI
Nucleotide Sequence
Copy to clipboard
Expand
ATGCCGGCGCCCAAGTGGTTCCAGA...
ATGCCGGCGCCCAAGTGGTTCCAGAAGCTCCGGGGGAGGAGGAGCAAGGGCAAGCAGCAAGGCCCGTGCGCCAGAGGCCTCGCCGCCGAGGACGCGCCGGCGCAGGGCCAGCGCCCGTCGTCGCTGCCAGCGCCCTGCGCCGTGTCCCCCAACCGGGCGTCCTACTACTTCGCCAGCGCGGACCGCGCGCGCCAGGACAGGGACCTCCCCTGCGCCGCCGACGCGGCGGCGGCCCTGCTGGACGTCCGCGTCGACGTGGTGCACCGCCGCGCGGGCGACCGGCGGCTCGGCGGCCTCGACGCGCCGCCCGGGACGCCCGAGCTCCAGCTGCGGCCCATCGTCACGAGGCCCCCCGTCGACGACGCCTCGGCCAGCGGTGGCGTCAGCAGCGCCAGCGCCACCACGTCGGCAGCCACCACGCCGTCCACCAGGGCGCGCAGGTTCCACGTGAGCTCGCCTATGGCCAGGCGCCGGCGCCGGCGCCGGTGCGACCACGACAGCGTCGCGATCAAGAAGGGGAAAGCGGCGGCCGCGGAGGAGGAGGAGGAGGAGGGGGAGGTGTCGCCGGTGCCGTCCCTGCGCGCGCCCACGCGGCGGCGAAGGCGGCGGTGGCTGTACGAGAGCCTGGTGGTGGTGAAGACGTCGTCGGACCCGGAGCGGGAGCTGGCGGAGAGCATGTCCGAGATGGTGGTGGCCAACGGCATCCGCTCGTCCGAGGACCTGGAGGAGCTCCTCGCGTGCTACCTCGCGCTCAACGCCGCCGAGCACCACCGCGCCGTCGTCGCCGCGTTCCGCCGCATCTGGCTCCTCCTCGACAAGCACAGGCTGCTGCTCATCTAG
Zm00001eb016130_T001 from maize genome v5
Amino Acid Sequence
Copy to clipboard
MCNQDEPTNSTKIGVDYKHGKMHAGMAWHGVQHVRRHSSHDSTVYATVAAPSAGEVRGCCTMCLDEQQPVLVEEEPDAAE
RGDDGAVVLGGVEREVAREELLQVLGRADAVGHHHLGHALRQLPLRVRRRLHHHQALVQPPPPSPPRGRAQGRHRRHLPL
LLLLLRGRRFPLLDRDAVVVAPAPAPAPGHRRAHVEPARPGGRRGGCRRGGAGAADATAGRGVVDGGPRDDGPQLELGRP
GRRVEAAEPPVARAAVHHVDADVQQGRRRVGGAGEVPVLARAVRAGEVVGRPVGGHGAGRWQRRRALALRRRVLGGEASG
ARALLLALAPPPPELLEPLGRRHGVTVDVERR
Nucleotide Sequence
Copy to clipboard
Expand
TTCTTCTTCAACCTTGCGTTGCGTG...
TTCTTCTTCAACCTTGCGTTGCGTGCCGACACACGTACAGCGAGCAAGAAATGCTGTCAGCTTTGCGTGATCCAATCCAACCAAGAGAGATGAGAGCTCCGTCGCAACGCGATTGCGGCACGAATGTGCAATCAAGATGAACCAACCAACTCAACTAAAATAGGTGTCGATTATAAACACGGCAAGATGCATGCAGGCATGGCATGGCATGGCGTGCAGCATGTTCGTCGTCACAGCTCACACGATAGCACTGTTTACGCTACGGTAGCTGCGCCGTCAGCTGGCGAGGTGCGCGGCTGCTGCACGATGTGCCTAGATGAGCAGCAGCCTGTGCTTGTCGAGGAGGAGCCAGATGCGGCGGAACGCGGCGACGACGGCGCGGTGGTGCTCGGCGGCGTTGAGCGCGAGGTAGCACGCGAGGAGCTCCTCCAGGTCCTCGGACGAGCGGATGCCGTTGGCCACCACCATCTCGGACATGCTCTCCGCCAGCTCCCGCTCCGGGTCCGACGACGTCTTCACCACCACCAGGCTCTCGTACAGCCACCGCCGCCTTCGCCGCCGCGTGGGCGCGCGCAGGGACGGCACCGGCGACACCTCCCCCTCCTCCTCCTCCTCCTCCGCGGCCGCCGCTTTCCCCTTCTTGATCGCGACGCTGTCGTGGTCGCACCGGCGCCGGCGCCGGCGCCTGGCCATAGGCGAGCTCACGTGGAACCTGCGCGCCCTGGTGGACGGCGTGGTGGCTGCCGACGTGGTGGCGCTGGCGCTGCTGACGCCACCGCTGGCCGAGGCGTCGTCGACGGGGGGCCTCGTGACGATGGGCCGCAGCTGGAGCTCGGGCGTCCCGGGCGGCGCGTCGAGGCCGCCGAGCCGCCGGTCGCCCGCGCGGCGGTGCACCACGTCGACGCGGACGTCCAGCAGGGCCGCCGCCGCGTCGGCGGCGCAGGGGAGGTCCCTGTCCTGGCGCGCGCGGTCCGCGCTGGCGAAGTAGTAGGACGCCCGGTTGGGGGACACGGCGCAGGGCGCTGGCAGCGACGACGGGCGCTGGCCCTGCGCCGGCGCGTCCTCGGCGGCGAGGCCTCTGGCGCACGGGCCTTGCTGCTTGCCCTTGCTCCTCCTCCCCCGGAGCTTCTGGAACCACTTGGGCGCCGGCATGGTGTCACCGTGGACGTGGAGCGAAGATAGGCAGCAGGACACACGGGGACAGAGAGGCCGGCGTCGGCTGCAGCCGCGCGGAGACAGGGGAGTTGGCGTTACGTGAGCGGCCGGCTGCGCGCCTGTGGAAGTGGAAGTGTGGAACTGGCTGGCTTGACGGCCTGCTAGATGGTGCAGGCCTTGGGAATTGGGAGCAGCACTCGCGTGATCAAAGTTATATGTAATGGGGA
Copyright © 2023 Grassius.org | Last updated: 2023-06-26